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<div style="border: medium solid #ff00ff;margin: 30px 30px;padding: 10px;display:none">
Dear refTSS user,<br>
Due to routine server maintenance , refTSS server will not be reachable
during the following date: <br>
<p><b>Date: July, 29th (Mon), 2019 ; Time: 13:00 - 15:00 (Japan Standard Time,
GMT+9)</b></p>
The server will remain available after the restart. <br>
If you have any question please contact us at reftss-help<at>riken.jp .<br>
Thank you for using refTSS
</div>
= refTSS: reference transcription start site =
The refTSS is an annotated reference dataset for transcriptional start sites (TSS) in human and mouse.  The dataset is generated by collecting, reprocessing and assembling various public resources.
== Data files ==
The raw refTSS data files are available at [http://reftss.clst.riken.jp/datafiles the data download page].
== UCSC genome browser Track Hubs ==
1- [http://genome.ucsc.edu/cgi-bin/hgHubConnect?hubSearchTerms=refTss refTSS UCSC Genome Browser public track hub description pages]
2- [https://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://reftss.clst.riken.jp/trackhub/hub.txt&genome=hg38&position=lastDbPos Human refTSS track hub]
3- [https://genome.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://reftss.clst.riken.jp/trackhub/hub.txt&genome=mm10&position=lastDbPos Mouse refTSS track hub]
== Contact ==
If you have any questions or comments, please contact to reftss-help<at>riken.jp .  ("<at>" should be replaced with "@")
== Please cite refTSS as: ==
Abugessaisa, I., Noguchi S, Hasegawa A, Kondo A, Kawaji H, Carninci P, Kasukawa T. (2019). "refTSS: A Reference Data Set for Human and Mouse Transcription Start Sites." J Mol Biol. doi: <html><a href='https://doi.org/10.1016/j.jmb.2019.04.045' target='_blank'>10.1016/j.jmb.2019.04.045.</a></html>

Latest revision as of 14:01, 19 July 2022